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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|24657925, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFPYIWALL PLICSASGLS LPNMTSTDAV VAGGGILPIL VAGNPGNLGS SNMSLSGGGG  60
   61 LAGSSTGGQS LPDTGGGNSA GGSPAGGSSG TGGGGSNSGI SGNNSAMIQG QKSNQYEKCA 120
  121 GPGDPGPCKQ YIYKWRYEPT TNECTNFIWG GCEGNPQNRF GTEAECLFHC IGGPHTLPPF 180
  181 LQSTTREPST TESSMLLGLP YTQSPAQSPD GMGGAEGGDG TTPVPIEQRG PELTFAETGQ 240
  241 GKTFIFAKNN TFIQMDGDII QTFQLRLCRE ISFQFRTRLP HGLLVYHNVK NPDRINLDPY 300
  301 ALYVIVEKGQ LKVVHVFGKH STSVTVGESL NRDEWHSVMV RIDVHGARLI ARVDNSQEEV 360
  361 YLKGLNHEYN YGVSTNLPSV VLVGGLSSEE KLHGVKYITE SFVGCIRNVV LSSGKAASDL 420
  421 LPIAPLVATK HENVNEGCSD MCESRHNLCF VGSRCINHYG GISCDCFGTH YEGEHCDIYT 480
  481 ATIITLRGAS YVSYRIYDWK DRVHSSTRRI SLMFRTNFDD SALFYASGES LKHQYIAASI 540
  541 KNQSVHVEMD FGDNVMSTVL TDDLTRGYWH NLTILHEQRT VSIILDQQQK VLELPATASG 600
  601 NMLFDPEIYF GGGPELHKKK GLASHNNFVG SLKYVYYNDI SILYELQRGN PKVHYHGVLE 660
  661 AEFVENEVNV IPITYPFATS HIWWPINHAE EFNIKFDFRS SRPGAVLAYS DVTTSAGNGF 720
  721 WEIRLTSDKL SFDLVPDVNN NVTHSTTIKI NRATSWHSVE LDYKLGEIRF TVDYRHTLSQ 780
  781 MYGLTFNIGD KLIIGSSLKS AAMGLVGCIR DIEINGHLIE PRHVVKTERV VGEVALDNCN 840
  841 YIDPCKRPNT CEHGGKCFVK DDRVTCDCKH TGYIGKNCHF TKYRKTCEEL ALLGFTKSDV 900
  901 YLIDIDGNGV FPPAHVKCDF QSLENATKTI VEHNLPSQVD VRSARESDFS FNIRYREFSP 960
  961 HMLQELISHS LYCTQYIKYD CYRAQLELHS ATWFTSSAKN LTVDFLGNVK RGACPCSVNK1020
 1021 TCVDPNQSCN CDVKENKWNS DEGYYQDPQS LGITNMYFLQ QKDMDDEAQG RITLGPLECV1080
 1081 ETNTQKYVVT FTTSQSYIEV PGWRKGDIAF SFRTTGEKAI LLFQPPIRPH YPSFMVALTG1140
 1141 DDQLTFTFTL STGTTRELVI NSHRRLNGGE WHKIWIDYNQ YHVRFMINTD YQMLDLLPEE1200
 1201 EFGPFEGSMY IGGATFDLLK KLSVKAGLIG CFRGLVVNGE ILDIYSYMSV HLSEIIKDCK1260
 1261 PSCVPSPCRN GAQCKELWSS FKCVCNNPWA HIGEFCETNI NEKALTFINR ESFLMRNYLS1320
 1321 VGATPVILMH GINGERDVLK GILNQDLLIN LRTYDTNALV LYANDHYNNF VHLYISLNRE1380
 1381 IVFLYNYGDE IVNLTLLDDT LMASLKSIQV AIVRGEQETR MHVNEHSVSI DRGTLLLDEY1440
 1441 ANKPWSNPEK EVLSPHRPPA PPTEYFQFHV GGYDPANLLR PNVDAPALEG YIGCVRGLKI1500
 1501 GAQLIDLADI NERNIAPTQE GVLPNCQIKC DAEPCKNGGT CQEHFAEQLS TCDCEHTSFL1560
 1561 GEFCSEEKGA DFSGESTLQR KFELPGTGRV DYVRLQLAFS SFDLRRANRI MLLMQTEAER1620
 1621 SYYLLLAITS DGYLQLEEDR DNGQTVGARI DRNFLNSARH SVYYVRNGTQ SQLFIDREQV1680
 1681 PLSEFAARVL TTGGDAGSNR VQIGGINSTD SRFAVFKSYS GCLSSECRKF HARLPLISFR1740
 1741 SHQVTYPFAP FAKKKKIEIK YTERI

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