YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CG15012-PC
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGVLDNIALH FTGDASRNRN TSIIAGLLFF AGWWVLIDAM SIDGKHQITT GHVFIGIFGT  60
   61 ISFCMVNAVK GEHISDENSS ESGARIAKIW LLVGFLMGFA SIIAAIWVMI DDFINNEKKD 120
  121 GWFGVALLMQ NVFILFASLV YKFGRNEEEW NE

Type	Start	End	Confidence
Cytoplasmic	1	20	0.94
Transmembrane Helix	21	40	0.92
Non-Cytoplasmic	41	47	0.85
Transmembrane Helix	48	69	0.92
Cytoplasmic	70	88	0.91
Transmembrane Helix	89	110	0.94
Non-Cytoplasmic	111	121	0.92
Transmembrane Helix	122	143	0.91
Cytoplasmic	144	152	0.93