YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|24657353, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.78
Topology Confidence:	0.56
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAIQDSSDSI VKHKAPLENH YPPANLVMAL IKITLICCAL IAAIECALLP AAVPVGVPLN  60
   61 TEVDPHPQYA FAYNVQDALT GDSKSQQEVR DGDVVKGSYS VVDADGSLRT VFYTADPING 120
  121 FNAVVQRGPV PVAARPLVAP VAAPILG

Type	Start	End	Confidence
Cytoplasmic	1	29	0.56
Transmembrane Helix	30	53	0.65
Non-Cytoplasmic	54	147	0.80