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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: wit-PA
Protein type: Globular with Signal Peptide
Type Confidence: 0.78
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNWAIYLLLA LISLGRATPV PNRQYSCMSY QEDDNSFHDD DGDQDSSGEL QEQQVESTPI  60
   61 PSEPHRRTCP DGYTFCFTIW NQTANGARVV KQGCWKDNTD RTSICSQSEC TSSAPTSKTS 120
  121 SLYYCCCSGG VCNAQYSVVE PAPLELGSNE GRTSITNRAT EKQHQSFLAS TMLGLAGGLT 180
  181 ALTIGIFLAV QYCRTAKEKP EPEESPLAPS GPGYSSNLRN VDNMNLIGML GSGKYGTVMK 240
  241 GLLHDQEVAV KIYPEEHHQY YVNERNIYAL PLMECPALLS YFGYDERCTM DGRMEYQLVL 300
  301 SLAPLGCLQD WLIANTLTFS ECCGMLRSIT RGISHLHTEL RLGDQHKPCV AHRDINTRNV 360
  361 LVQADLSCCI ADFGFALKVF GSKYEYKGEV AMAETKSINE VGTLRYMAPE LLEGAVNLRD 420
  421 CETSLKQMDV YALGLVLWEV ATRCSDFYAP GQATPPYKAP YEQEVGSHPS FDQMQALVVR 480
  481 HKARPLFPTG WGGGAAAKVV RDTCEDCWDH DADARLTSLC AEERMQEMST LRPRAQAQPS 540
  541 SPLLNTNNLV ASPTAEQGIN IIATTTTAAA VHHQMSSDTT GLIQPPPNQQ IPLAALEREK 600
  601 NHLSYPQQQL QPYQGRNPCQ ERNLAPLTMR TPPVLVERSK KHSFQTQPQE NSLSCLEHDV 660
  661 SVEELIASHQ HQQQKNTIVS TGGNGNSCLG QGFPKQQNTD QKLRGWHGVR ALIHKKLFRK 720
  721 EHAEELCRQL QLGEEKSNLV TALRRPNNLD LNPRLDKPPP DQLRSAEQRM GTPAHIVPRS 780
  781 LSSSLIKHIN GTTNNNSIQS HGSELQTLTR PASKRRPGHL RTNSLMATTG QGPPTEQQMR 840
  841 RQHSLEVFRE VFSGRGSSER LRDPSERVKT PGDVPPSVRK ARASKTLSLY DDRMMDSSLL 900
  901 NIL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle