YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|220954288, gi...
Protein type:	Transmembrane
Type Confidence:	0.86
Topology Confidence:	0.72
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSDPEIEFI EKDSGMSSLG GSKDETPERR AVAATSNDPQ RENYDDEPDE TASERFWGLT  60
   61 EMFPEPVRNA VGAVSSATVK SVKGFYSFSC NASWIFFTSA VILFAPVIFE TERAQMEELH 120
  121 KSQQKQVLLG PGSAMGPGGP SPSLPLIR

Type	Start	End	Confidence
Cytoplasmic	1	84	0.74
Transmembrane Helix	85	109	0.72
Non-Cytoplasmic	110	148	0.83