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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: enc-PD, enc-PB
Protein type: Globular with Signal Peptide
Type Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSTKSQVAL ATNIPTNLSS AASASTAAAA AAVVVVASAN AAVASSANSS GVGSGSGPGP  60
   61 GSGAGVSGPV AAGTATAVAT GSTVTAATSV AATTSTSVAT ISTSCSSSSI NNINNNCGEE 120
  121 CQSAAGSSNL GRQNSFGNRR GNMKGKHLTR SHAMRESTSP PRTPTPRAAS EQQQQQLQGE 180
  181 QHEHNNNNNI NSSSKAQSAG RGNSPLMETP AVIVTSQQPQ QQQQQQQQQQ QSVPPKPQQN 240
  241 VPLSNEAEFP KLSPPKKSGG QHNRTNSNGS GMEFNNNNNS SNKKFVVDMK ANGLDNKPHN 300
  301 NSSTGVIFNS GMNYKAAERH DRHERHEMSS QNSNLSNNHD EEPYHYEPRG GGGGKKHRAN 360
  361 TNAKGNKPRL KNLGGSSSGS IDLGGGGGNG NCNNMSNNGQ SNNSSNNTSG FISRENSSEQ 420
  421 YTDYGGTDLL VFFRDTLNKN PKDRNILLKI EKDLIDFVQE NSRGCEYRFP PASSYNRMLI 480
  481 HRTAAFFGME HNVDTETQQC VIVAVAKNTR IPEIRFQSLV RDDARKSILK RDTHSFDEVR 540
  541 QSPYLCPLSL DRKAKSFEER EEDYDRARSR IFSRTGGNHD GYSGGGGDEE CYGGWEQQQQ 600
  601 QQKQSQPPRP KRPNGKMLQM QNSTESRDGM RSGGAVPKSH NFGNYGGPPS SGGPGNNSLP 660
  661 RGDSTNSIKS GRGGFVKQDS TGSTPWRLSP SSSGSIYHYD PSNLPPNQAL QHSGNQYQSQ 720
  721 NQGNSSSGGY NNYRKSSPHQ QQQSQQQQQS QQHHQQQLQQ PQQLHQQSSQ QYATTELSCS 780
  781 STESYAEEEA QSPGMECSEG YESYEQQSLP VQQQLSGNGD SASTKGDDCD SLASATACLS 840
  841 ITTSTSTKNY DRIEVQKYKN QATSPNIPAC CAVGEKLELE AGLPQEQEQE PMAGPSSSGS 900
  901 ATSSVGITEL PSSQTPLPMV NQVNCDLQSV SPSTTPYSQC EVKTPSQNHA PSAAVEEPKT 960
  961 TTWTYTQSYQ APDGSTVFHT TTTPNGAAPY CATTYQQGPD GSIYAVPQGM VYAAYPQPGV1020
 1021 GTAGGASQPL FQLTTSSHPP AQTIFASPEA GAEIPGGTYM IPVFDPAQQP REGLIPAQAI1080
 1081 YQTGPGGPGA TTVMPMATAA AYPTAQFATA APNGAPIYQA PLIYSSEPGG GAQLQQLPMA1140
 1141 PYPIQYSYPY YHPISYYVPQ QAVAAAPMVA SQPQVGQAPM QQQAPHTGAG TTTGPPTVVS1200
 1201 VSGQQHHQPH QQHHQQQQHS SNGSVVTSSA YGTRVKRTPG GGSIHYNPSY TPSSVAHAGG1260
 1261 AHHPSAGSAQ IIAAPAASTT TYHALPTLTL AHGGPATGTD LSGAGGAHVY ALPAQHALIP1320
 1321 TNIFPYAAAA AAAAGGPGGP PTTPQVVQQA PPPPPQSAPH HALITAAPFY PANGGNMDQG1380
 1381 ASQSAPSTPA APGRQAPLFS TPPAPNNGSS GSSSAGGGGN SGGYHSNSST PHYYQGQNSN1440
 1441 EGYTSPYEKR NHGGGASGAH SVGVRKPYHP GGYNPRHSVP LGGIPSGAKT PLLNSNNEPT1500
 1501 PRASPSSVSL GGASSSGGAN SYPHRGPPPH TMGVKRDNKP NQLPLISGPP PSYAANSSPG1560
 1561 VSSYESKPPV RLNAGAASFR SQKSMNQDYR RSVSQRNSPS ANGGGSGSHE SSNNSPNSIV1620
 1621 GSQSNSAANT PNAAAPPPPQ PQPTLVSHSG GFVVLDQTTG AAMNASPPSL YGGGGGPNAG1680
 1681 ISGGAGASGA AGSNGGHQPG GGGGARSHIP TAQLHHSAAA AAAAAAGSQQ ATAAVLSGVA1740
 1741 AAAALGGYNP NGASGVYFKY GQTYFAHPSV ALPNSRRSPS NDIRPQMAQV AGMYPTMMIQ1800
 1801 ARHPSRHPNP NYKGSRPR

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