YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PHGPx-PC
Protein type:	Transmembrane
Type Confidence:	0.66
Topology Confidence:	0.42
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGRSIVHFF LGSVAIALGS YIYFTMQIDM SANGDYKNAA SIYEFTVKDT HGNDVSLEKY  60
   61 KGKVVLVVNI ASKCGLTKNN YEKLTDLKEK YGERGLVILN FPCNQFGSQM PEADGEAMVC 120
  121 HLRDSKADIG EVFAKVDVNG DNAAPLYKYL KAKQTGTLGS GIKWNFTKFL VNKEGVPINR 180
  181 YAPTTDPMDI AKDIEKLL

Type	Start	End	Confidence
Cytoplasmic	1	5	0.42
Transmembrane Helix	6	24	0.63
Non-Cytoplasmic	25	198	0.77