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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|24656617, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.80
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMLQLLLFCL ALFIFVYWVL PTGISWYLVK RFRVKVRIGR ISLPYLSLKN VHISKSGFSV  60
   61 QIEEVCLRSS FFTTEVTKLL SIYIRDIRIN KDIHSRQDDS YDQDSYELRR TQTLAGKASE 120
  121 AKGVPDFRQT KVPASIITFA QFMAVHVNNI SVVLMNNDFD PGWFIHATAK ELHLDGSIVQ 180
  181 NARVLLVNAA LSEAQAKMLR HCSSRRQSLE NLNKIRPCLG EVSFDMTLDA SLFAQGPLSM 240
  241 DTLSLVINNA KSVIHGGLYE FLSEAKRRTS TGQPSRRSTQ GLAPSKRSYD NDNYEKLAPI 300
  301 IPKNFNFSIK AATFSAVKEN SQNDFSAKLQ SFQISGKFNS KVTDEKTLLP SMLAKLGFHH 360
  361 LDIDTKYEKL LFVEQFTIDS VLEKDIFNLY VKLKTFQIIY NHSEIYDFVN NNFLARQRSS 420
  421 EAQPMQLIHK QKSLPDHLDL DTAVQSNLRA NQRREGGVLE WIMQRIVVKG CAELFNVSLL 480
  481 MKLEDEHIAM SVSHTRFLLE QIEEKRSNLY ENKFLNLLLN QRQWSMELMV ETLWSNLGNS 540
  541 INDTNNLKKT HSPGSPFFLG VSLVKLCSYA NTTKLDISVH TFRTEYSMQL AEFVVKSMEC 600
  601 LRQYRGIKPK NMSGQSHARP NAGLTLSVQP SQSSTSLRVS VKVKDITAYF VNHHNVYSLL 660
  661 SFSELNLSRS QSLTTLKLEE FQMAIMRSMT ASSLCLTDFS DVFATCKMIR LEHEQVEGTM 720
  721 GKLSIYIPGN MEATWNSNLH MHLLTLVRDM QDLKTELAIP ASSVKKTTPK EGFIVELSAE 780
  781 RSTIFEIKFS DRHSIQIFVE SLFFSQKERC IIYAENVFVK IDDQHIFTVK ELDLQSVPRL 840
  841 EVLTQERQNF PGFQLPSNKV WVTTIGSFKA IFPYDHDFYN AVNGECTSHF KWLKMVHNYK 900
  901 KKPFTVDSPL PCDLVIKIKE FLLEISDDPF EVKLRDNYVL LVDEYLESLK RKALFDKKIG 960
  961 ELCSERLLLP SGTIEGLYAN LVKKNSEIYI QRSKKIRESG PVRTRLLAWI MTDVNIMAMA1020
 1021 DTSIHGYNNV TRIMREIDHE SPWPEEGLEF STLWCRGVNI SCTEWKFMLR DFPQPMFCVK1080
 1081 SMRLYGNLCG AEQMGSKRAK RDVFIDVGEP FGTDVIQRSM PSLKFYHDFD CELESCSYAF1140
 1141 GACWEPLRLL LHGRLTLIAK QFTILLHASL DPYNTTEEME LTWNNCGIVL TNAKIMFKGE1200
 1201 LNVTVRTASR YDDCRLLHFP NLKLTIKLKW VCLANPNDHH AVMPCAPDKL PEYSSNQVHD1260
 1261 SFRAFRSLNL NIWISFETKP KAGEDLEVDI PSLVLYGSTL RWFESLQLIL SGVTRPTRRG1320
 1321 PVFNNVRPRK KPLSRHYKKA NLQMCLHKFQ VLYWMSHALQ KGFQLNGRRV SFSSEHSLTL1380
 1381 NPIDDGLIHR PRADWSTIYM NCELNDAEIW LKSILTEKMD SSSENLASAA DAFKIVRFYF1440
 1441 LSVAKVSYGR EALIPTTATS TEEDVKAQST TPTHKLVVYD LKGAWTKSNR DVAFALFDSF1500
 1501 MKSQKLKNNL STEAVKSYRK EGPNSAVLKH KRSDSTITLS STNNEVLPIS NPNASMKKAP1560
 1561 AQIHATAMLQ QLIAEADHKF NVYSDDHSTQ SRELQLQGLQ ACSAQDIIHE NWSISLVNSQ1620
 1621 VLLKGCETSG YVIISAAKAE ILQREHRPVW RERSLISKTT WKGLLECMQY YATVSAGDNN1680
 1681 SLLEKEIMWL TVDNIQDKDE TVINNLPDIS HLVGSGRSVG GVVSETVGAF LSDNSGGAQP1740
 1741 VQLQRIVSKC KCEFFYVSYG DAIDPNSITE VPPPPSEELQ SPWEKQDDPV DAFTLMHHDL1800
 1801 DVCTNSLQYA MILDIVNNLL LYVEPQRKQA AEKLTRMRFQ LQLHSTEDQK RPIQQKQTVI1860
 1861 RSLLMKIRSL EKDTHMISKE RIEDGDSLEL RQEYDHVQQM IRESKEELNT FSEDLDMMLL1920
 1921 CYKETQLSQL SKISNVRSDE SVTMVRTNEI CFKRAQWRLT ETDGQIGIAD LVLSAFLYTK1980
 1981 KSKSDDSVEH LLELGNIRME NLLPREIYRD VLLATEIQKD MPVDTHKRVL RIFCREKAPV2040
 2041 GGISVKEHFE INVAPITIAI TKKFYSTMLK FCFPDRDASE TEVSDELDDN ASTSSASTTN2100
 2101 LQAKSSTSSS TKRSGKGKKG AKDSEFYVKI EKDDVEKMKE RAEKNKLFIY IKIPEVPVRV2160
 2161 SYKGNKEKNL EDITDYSLVI PTLEYHNVTW TWLDLLLAMK SVSRRVIFSQ AIKQKLHIHQ2220
 2221 RQPILSAGER ATPQEAEDKA VMLFGNRLLN ENRNQKKGVF KFASSGKRSG ND

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