YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CG11537-PC
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Predicted Protein Segments [Hide List]:

Type	Start	End	Confidence
Cytoplasmic	1	35	0.95
Transmembrane Helix	36	58	0.84
Non-Cytoplasmic	59	69	0.81
Transmembrane Helix	70	93	0.85
Cytoplasmic	94	101	0.72
Transmembrane Helix	102	120	0.92
Non-Cytoplasmic	121	124	0.76
Transmembrane Helix	125	147	0.91
Cytoplasmic	148	157	0.88
Transmembrane Helix	158	180	0.90
Non-Cytoplasmic	181	187	0.83
Transmembrane Helix	188	208	0.95
Cytoplasmic	209	243	0.92
Transmembrane Helix	244	260	0.81
Non-Cytoplasmic	261	277	0.72
Transmembrane Helix	278	300	0.86
Cytoplasmic	301	310	0.61
Transmembrane Helix	311	329	0.85
Non-Cytoplasmic	330	335	0.80
Transmembrane Helix	336	360	0.87
Cytoplasmic	361	371	0.87
Transmembrane Helix	372	394	0.85
Non-Cytoplasmic	395	427	0.90
Transmembrane Helix	428	446	0.96
Cytoplasmic	447	488	0.92

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPKIHVKKPL AGLVIRNRAH KSKSVFTSSG IGEPSVHHAL VVIFLEFFAW GLLTMPIIST  60
   61 LNQTFPDHTF LMNGLVMGIK GILSFLSAPL IGALSDIWGR KFFLLVTVFF TCLPIPLMSI 120
  121 NTWWFFAMIS ISGAFAVTFS VVFAYVADVT TPEERSKAYG LASATFAASL VISPALGNAL 180
  181 MEMYGDTLVV ALSTAIALLD VFFILVAVPE SLSEKMRPAS WGAPISWEQA DPFLALRKVG 240
  241 TDKTVLMLCL TVLLSYLPEA GEYSCMFVYL KLKMGFNYVE VSVFIAIVGI LSITVQVTLG 300
  301 SFMQVFGAKR TIIMGLALEI VQLLWYGFGS QKWMMWSAGV VAALGSITYP AISAFVSLYA 360
  361 APESQGAVQG MITGMRGLCN GLGPAVFGVV FYLFNVDLND DHDSHAKSSG SRATNVEKIS 420
  421 QHVPGPPFVF GALCVFCAII VSAFIPEGQT STLEKKRASL DVQYEIEPGH KAPSSLAPLI 480
  481 RSDSLAQL