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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|23092863, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFPPRLLRIA FVICLLIVLL SPSADSAQTK TRRRLRRPTT SVSSSRSNLI ESKKSTEAPE  60
   61 AEKRIDQITS ATTTSARRTR LRSKAKLGAA AAGGAAVAAG GTALVASGSS LKGKKTKVDD 120
  121 GTPKIVCYYT NWSQYRVKIG KFVPEDIPAD LCTHIIFAFG WLKKNKLSSY ESNDETKDNV 180
  181 PGLYERMMTL KKANPKLKIL LALGGWSFGT QKFKDMSSTR YTRQTFVYSA IPFLRKRGFD 240
  241 GLDMDWEYPK GSDDKKNFVL LLKELREAFE AEAQELKKPR LLLSAAVPVG PDNIRGGYDV 300
  301 PAIASYLDFI NLMAYDFHGK WERETGHNAP LYAPSTDSEW RKQLSVDNAA SLWVKMGAPK 360
  361 EKLVIGMPTY GRSFTLANPD KHGPNAPASG GGREGVYTKE GGFLAYYEIC EMLLNGAVYV 420
  421 WDDEMKVPYL VDGDQWVGFD DERAIRNKMH WIKSNGFGGA MVWTIDMDDF KGEVCGGNVK 480
  481 YPLIGAMREE LLGISRGKEA KDVNWTAVAA TFEDIEEKPE PIKISVDEIL NKVRKPQVQK 540
  541 KQRIKSGANA VASNTRPAQV FCYLTSWSAK RPGAGKFQPE NIDPKLCTHI VYAFATLQDY 600
  601 KLTEATDDDP ENYESVIALR DNNPDLQILL AIGGWAFGST PFKELTSNVF RMNQFVYEAI 660
  661 DFLRDYKFNG LDVDWEYPRG AEDRVAYVSL LKELRVAFEG EAKSSGLPRL LLTAAVPASF 720
  721 EAIAAGYDVP EISKYLDFIN VMTYDFHGQW ERTVGHNSPL FALESATGYQ KKLTVDYSAR 780
  781 EWVKQGAPKE KLLIGMPTYG RSFELVNDTQ FDIGSPSSGG GKAGKFTNEA GFLSYYEVCS 840
  841 FLAADNTTLV WDSEQQVPFA YRGNQWVGFD DERSLKTKTE WLKEQGFGGI MVWSIDMDDF 900
  901 SGRCGSGKYP LLTALNDELK DYKVELEYDG PYESHGPRGA YTTKDRERLR LARERRGMPH 960
  961 AHGGASLRPP SSDGLVNIME SMP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle