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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: FBpp0293732
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.77
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVGERDRDRE AVRWATGEST PLQTNNGVLQ MVGQLQGGQA AGQQQQQQQA TQQQQHSKQQ  60
   61 QQQQQQQQQQ LQLKQHQQQQ QDILYQQHNE AIAIARGLQA ATPADIGDNQ PYYDTSGNVD 120
  121 WERAMGAGGA GAYGGIGIGS LPAAGGAAYH LGPANPAGLV SRHLDYGDGG HLAGPSAGLP 180
  181 AGAVGSGAGA GAGAGASVTG SGSGAGTGTG TGAGSGSGSG AAGKEVRYAP FPVASPTHSI 240
  241 PTTSQQIVGS VGGVGVGGAS SQSISGGVPT HSQSNTTGAL QRTHSRSMSS IPPPEPFMIA 300
  301 QSKAVNSRVS INVGGVRHEV LWRTLERLPH TRLGRLRECT THEAIVELCD DYSLADNEYF 360
  361 FDRHPKSFSS ILNFYRTGKL HIVDEMCVLA FSDDLEYWGV DELYLESCCQ HKYHQRKENV 420
  421 HEEMRKEAES LRQRDEEEFG EGKCAEYQKY LWELLEKPNT SFAARVIAVI SILFIVLSTI 480
  481 ALTLNTLPQL QHIDNGTPQD NPQLAMVEAV CITWFTLEYI LRFSASPDKW KFFKGGLNII 540
  541 DLLAILPYFV SLFLLETNKN ATDQFQDVRR VVQVFRIMRI LRILKLARHS TGLQSLGFTL 600
  601 RNSYKELGLL MLFLAMGVLI FSSLAYFAEK DEKDTKFVSI PETFWWAGIT MTTVGYGDIY 660
  661 PTTALGKVIG TVCCICGVLV IALPIPIIVN NFAEFYKNQM RREKALKRRE ALDRAKREGS 720
  721 IVSFHHINLK DAFAKSMDLI DVIVDTGKQT NVVHPKGKRQ STPNIGRQTL DVQSAPGHNL 780
  781 SQTDGNSTEG ESTSGRNPAT TGTGCYKNYD HVANLRNSNL HNRRGSSSEQ DAVPPYSFDN 840
  841 PNARQTSMMA MESYRREQQA LLQQQQQQQQ QMLQMQQIQQ KAPNGNGGAT GGGVANNLAM 900
  901 VAASSAATAV ATATNASNAS NTAPGSEGAE GGGDGDGGGV DDDNLSQAKG LPIQMMITPG 960
  961 EVAELRRQVA LENLQNQRMD NLEQDVPVEF ECCFCTTKGL PGCHGECIPL RANSV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle