YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	spz5-PA
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTKSIKRPPP FSCKQVLLTY VILAYTVAAH SSPPPCGLYG APPCQFLPAP PGQTPTCARP  60
   61 GKTYCEHADN YPTYLIKSLV RKWGYEAATL LVDETWEDFA AVAWHDTPVF YDPKSIFPPR 120
  121 DPAAQDFNGY SYQTPFGGNP QRPSGGGNPL FVSNPSTEAP TYLLYTSSGG GHRSGHRYNS 180
  181 QGGGTSSSGG HLYINQSDKS TPYNATLWLK RLVRDLSRKQ RQPDEVQAEV VEPVNEQTEE 240
  241 AEEQDNPAED HPQSKRDVSL NMDLLDIVGV EAPNPLKKRS RTKRQSPGRS TLCQTTSQFI 300
  301 TPQAALNSRG NWMFVVNEQN TARQMVKAEL CASNTCSNLC ELPNGYNSRC EQKFVQKRLI 360
  361 ALQGNGQNLY TDTFWFPSCC VCTIAAN

Type	Start	End	Confidence
Signal Peptide	1	29	0.97
N-region	1	20
H-region	21	26
C-region	27	29
Cleavage Site	29	30
Non-Cytoplasmic	30	387	0.99