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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: oxt-PB
Protein type: Globular with Signal Peptide
Type Confidence: 0.71
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEQSVSARWL KRYRAFFLIL LLIVAIQLFL AYKSLDIVGG GSGSGFDAAE APASPPPPHA  60
   61 QARVQPPART KLTAQQLGFQ PECDILAREA ISALQRAKTK DCREHIAQIA CAIQAGRFYA 120
  121 PQLRSSCPAG NHTANVSLGC FKDEKDRRLL AGYYSSSKTS NSPAKCVELC LQSGYPYAGV 180
  181 QYGRECFCGY DPPPKASKLP DSSCNTKCLG NAKEICGGFY AMNIYETGIA KFTAQLAATT 240
  241 PSEETKRVRI AFLLTLNGRA LRQVHRLLKA LYAPEHVYYI HVDERQDYLY RKLLELESKF 300
  301 PNIRLARKRF STIWGGASLL TMLLQCMEDL LQSNWHWDFV INLSESDFPV KTLDKLVDFL 360
  361 SANPGRNFVK GHGRETQKFI QKQGLDKTFV ECDTHMWRIG DRKLPAGIQV DGGSDWVALS 420
  421 RPFVGYVTHP REDDELLQAL LKLFRHTLLP AESFFHTVLR NTKHCTSYVD NNLHVTNWKR 480
  481 KQGCKCQYKH VVDWCGCSPN DFKPEDWPRL QATEQKSLFF ARKFEPVINQ AVLLQLEEWL 540
  541 YGPYTSEYAN LHGYWQSLYH HEDVHGSGDD LARSIGDSVM RLSARQAKLY PLELIELTHY 600
  601 LHRDQYKGFL VRYRARGSTG KPLHLETRVR PTQQGKLARN ARFSKRLRNF EVSTDFDQKE 660
  661 QIARNFGKLL GPQSDLLLSY TLQANADSGA ASHSYNLTLL WIDPLGRLQD FNELHVEDST 720
  721 SDVINHSKTL LKHPITPGIW TAKLIGRNSI YAQLKFLIAP LAYYKGYPLA KSSDAEALNA 780
  781 GLTVALPEDF EMPVEWQQHL QTDDEQFTMR EESLAKGKML GQELHSWIDG LVGQFFQLRE 840
  841 SCVVEADSEV SLPLCSDAPW SSLAPDPKSD VDALLK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle