YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|24655718, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLSKSLANC RAIRRYLLIF TAVSLLLLPL SLAYLVWNEQ LQKIRGFEDS NQTLLPLIPE  60
   61 HAVQTLTPQE MLQVEQRMDQ RRERLKDKCS AYGLDVLGHD AWHTPNTWEF LVNKKYHIIW 120
  121 CNVFKAASSS WMFNFNVLAG YSPSYLRKTK KILLNLARER YPRVTLDENY SVTFIIARDP 180
  181 FERLLSAYRD KMVFALPYSF HDKLGRSIVR NYRKKPSLAA RAANTKFPSF PEFVHWLLDQ 240
  241 VKRGSFIDMH FVAATSFCTP CLIRFDMILK FESLAEDQLY LIEKTGLKRV IAPVWRNMGK 300
  301 GRKTHELQQQ FYAQLTRQEM LELYEYYKYD FELFDYDIQE YLQVARPDEA ESPAGTKN

Type	Start	End	Confidence
Signal Peptide	1	33	0.96
N-region	1	24
H-region	25	30
C-region	31	33
Cleavage Site	33	34
Non-Cytoplasmic	34	358	0.99