YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FBpp0306200, Cht...
Protein type:	Transmembrane with Signal Peptide
Type Confidence:	0.73
Topology Confidence:	0.51
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTLRSRLSGE APQLWLLLLL ASTASSLWAS VAARTGPLHD KVVVCYVSTW AVYRPEQGAY  60
   61 AIENFDPNLC THVVYAFAGL DITQAAIKSL DPWQDLKEEY GKGGYEKMTG LKRSHPHLKV 120
  121 SLAIGGWNEG SANYSTLVAN NLLRGRFVKQ VSSFIRKYNF DGLDLDWEYP TQRKGKPADR 180
  181 ENFVLLTKEL REEFDEHGLL LTSAIGASKK VIDEAYDVRQ ISRYLDYLHI MCYDYHGSWD 240
  241 RRVGYNAPLT APADDPLSVK FSIDYLLKLG APPEKLVMGL PFYGRTFKTL ASGFLNDVSE 300
  301 GVGFKGPYTR EDGFLGYNEI CQTLSNQTSG WTREWDPQTS QVLAKSERNV FTQEINVVTY 360
  361 DSSRSIANKV LFAMSKRLAG VMVWSVDTDD FLGNCKLDED TYEDFQKVTA APKRSSQNYP 420
  421 LLRTINEATM LAVDELAVPE PQPDDSENEI PHGSIADRKN AGASMVSLGL GVTAVFMLLH 480
  481 RLAQ

Type	Start	End	Confidence
Signal Peptide	1	32	0.97
N-region	1	23
H-region	24	29
C-region	30	32
Cleavage Site	32	33
Non-Cytoplasmic	33	460	0.99
Transmembrane Helix	461	480	0.71
Cytoplasmic	481	484	0.51