YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	n-syb-PF, n-syb-PA
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADAAPAGDA PPNAGAPAGE GGDGEIVGGP HNPQQIAAQK RLQQTQAQVD EVVDIMRTNV  60
   61 EKVLERDSKL SELDDRADAL QQGASQFEQQ AGKLKRKFWL QNLKMMIIMG VIGLVVVGII 120
  121 ANKLGLIGGE QPPQYQYPPQ YMQPPPPPPQ QPAGGQSSLV DAAGAGDGAG AGGSAGAGDH 180
  181 GGV

Type	Start	End	Confidence
Cytoplasmic	1	104	0.97
Transmembrane Helix	105	126	0.90
Non-Cytoplasmic	127	183	0.94