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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: cue-PA
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIRIRFGMDV LLVLLLATCL LTPAHGTPLE WDFAVTLRTK IQFMDSSWQT IATAAHEFDE  60
   61 LSALTFDESE ELIYFNDLKH RNGSIFSLKR DLIAANHVAE QTIARTGNES VGGLAYDPLN 120
  121 MNLFWSDTEQ RKIFFAPIHG SATPQVLVDL SAEGGRPDGV AVDVCRRKLY WTNSNVTHPT 180
  181 VERINLDGSN RTVIISSNID MPRGIVVDQL SDRLFWIDDL KGVFFSVESS KLDGSDRQVV 240
  241 LKDKHHEPLN LAVTNDAIYW TDRTTRAVWS HPKVPVIKVT TTSKPDEEDS TDSTDFKDPE 300
  301 PVAEDCPLVR VANLSEEARG IVARTGFYQR LQKDHHCASI VRKVKERVDE QSRKFEIRSL 360
  361 LDQKIKVLED ERCMNDGEYR AATDLCICPT GFKGSRCEIR ECHNYCVHGT CQMSELAYPK 420
  421 CYCQPGFKGE RCELSVCSGL CLNGGHCRVS KDENEAPSCE CPAKFGGARC EQNSTEICSL 480
  481 FCRLLKHEPE MYVPFGCHSI CEELAQDNST NIAIPQYQHL EVCLTPRVWT SSVIIILVVG 540
  541 IVSSLLLVAV IVQGIRRLYK PKRPRIRKTF VVRKQARTNS AGDTPLTNRP LATEQCEITI 600
  601 ENCCNMNICE TPCFDPKLVE QTLSKSSCKE DKKILIHNME DDLY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle