YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|220946882, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.77
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQEAYVNINS IPTHIFTWGR WIEETITEKE IVICITGNPG LPGFYTEFAG TLQKELGDLP  60
   61 VWVIGHAGHD DPPEASIREV PQLSGNEELF NLDGQIRHKI AFIEKYVPSD VKIHLIGHSI 120
  121 GAWMILQLLE NERIRSRIQK CYMLFPTVER MMESPNGWVF TKVAMPLYSV FGYIFFSFFN 180
  181 FLPVWLRLML IQIYFLIFSI PRQFLGTALK YSKPSVAEKV VFLADDEMAR VRGIQREIVE 240
  241 QNLDLLKFYY GTTDGWVPIS YYDQLKKDYP KVDAQLDTKK IDHAFVLRHS QPMAVIVRDM 300
  301 IQQHRRV

Type	Start	End	Confidence
Cytoplasmic	1	157	0.92
Transmembrane Helix	158	179	0.84
Non-Cytoplasmic	180	183	0.68
Transmembrane Helix	184	205	0.77
Cytoplasmic	206	307	0.86