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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: bab2-PA
Protein type: Transmembrane
Type Confidence: 0.78
Topology Confidence: 0.67
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDMTKQIVDF EIKSELIGEI DQFEASDYTM APPEEPKMVE ESPQLGHLED QNRKYSPERE  60
   61 VEPTLQDPSE VVDQMQKDTE SVGEVKSPEK DVETELVKSK ASPMNDQALT PPPRPLTSSE 120
  121 VVGLRDPEHT ELRMCLEAKK SRSLPVSPQP QPNLKLAGSA LFEFGQRSSP VETKIKTNPE 180
  181 TKPPRRKIVP PSGEGQQFCL RWNNYQSNLT NVFDELLQSE SFVDVTLSCE GHSIKAHKMV 240
  241 LSACSPYFQA LFYDNPCQHP IIIMRDVSWS DLKALVEFMY KGEINVCQDQ INPLLKVAET 300
  301 LKIRGLAEVS AGRGEGGASA LPMSAFDDED EEEELASATA ILQQDGDADP DEEMKAKRPR 360
  361 LLPEGVLDLN QRQRKRSRDG SYATPSPSLQ GGESEISERG SSGTPGQSQS QPLAMTTSTI 420
  421 VRNPFASPNP QTLEGRNSAM NAVANQRKSP APTATGHSNG NSGAAMHSPP GGVAVQSALP 480
  481 PHMAAIVPPP PSAMHHHAQQ LAAQHQLAHS HAMASALAAA AAGAGAAGAG GAGSGSGSGA 540
  541 SAPTGGTGVA GSGAGAAVGS HHDDMEIKPE IAEMIREEER AKMIESGGHG GWMGAAAAAT 600
  601 GAASVAADSY QYQLQSMWQK CWNTNQQNLV QQLRFRERGP LKSWRPEAMA EAIFSVLKEG 660
  661 LSLSQAARKF DIPYPTFVLY ANRVHNMLGP SLDGGADPRP KARGRPQRIL LGMWPEELIR 720
  721 SVIKAVVFRD YREIKEDMSA HQYANGQGHG TYIGGGTTTN GYHSAAAAKL AAQNAALAPP 780
  781 DAGSPLSSMT ETLRRQILSQ QQQHQQHHQQ QAHHQQQPSH HQQQSPHAQS MNMYKSPAYL 840
  841 QRSEIEDQVS AAAAVAAAAA KHQQQQGERR GSENLPDLSA LGLMGLPGLN VMPSRGSGGG 900
  901 SGGAAPNSAA SYARELSRER ERDRERERER ELSRQYGSQS RGSSSGSGSA KSLTASQRPG 960
  961 AASPYSAAHY AKHQASAYNK RFLESLPAGI DLEAFANGLL QKSVNKSPRF EDFFPGPGQD1020
 1021 MSELFANPDA SAAAAAAAYA PPGAIRESPL MKIKLEQQHA TELPHED

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle