YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FBpp0303818, Gr6...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.40
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRTSDDIRK HLKVRRQKQR AILAMRWRCA QGGLEFEQLD TFYGAIRPYL CVAQFFGIMP  60
   61 LSNIRSRDPQ DVKFKVRSIG LAVTGLFLLL GGMKTLVGAN ILFTEGLNAK NIVGLVFLIV 120
  121 GMVNWLNFVG FARSWSHIML PWSSVDILML FPPYKRGKRS LRSKVNVLAL SVVVLAVGDH 180
  181 MLYYASGYCS YSMHILQCHT NHSRITFGLY LEKEFSDIMF IMPFNIFSMC YGFWLNGAFT 240
  241 FLWNFMDIFI VMTSIGLAQR FQQFAARVGA LEGRHVPEAL WYDIRRDHIR LCELASLVEA 300
  301 SMSNIVFVSC ANNVYVICNQ ALAIFTKLRH PINYVYFWYS LIFLLARTSL VFMTASKIHD 360
  361 ASLLPLRSLY LVPSDGWTQE VQRFADQLTS EFVGLSGYRL FCLTRKSLFG MLATLVTYEL 420
  421 MLLQIDAKSH KGLRCA

Type	Start	End	Confidence
Cytoplasmic	1	78	0.59
Transmembrane Helix	79	98	0.89
Non-Cytoplasmic	99	111	0.70
Transmembrane Helix	112	131	0.90
Cytoplasmic	132	164	0.87
Transmembrane Helix	165	184	0.93
Non-Cytoplasmic	185	229	0.84
Transmembrane Helix	230	257	0.70
Cytoplasmic	258	334	0.71
Transmembrane Helix	335	356	0.87
Non-Cytoplasmic	357	406	0.56
Transmembrane Helix	407	422	0.40
Cytoplasmic	423	436	0.61