YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|220944496, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.65
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLVWTLIAG FLYAEIALVL LLVLPVLTPY RWNRFFKSKF LSMLGQQAHI YFLLIMGILV  60
   61 IFLLEAIREM RKYSGLQQSN EVHLNVEMQH SMKLFRAQRN FYISGFAIFL ALVIRRLVNL 120
  121 ICTQANLMAQ SEASFKQAQS ATAAARSLLE NKNTEKAKEA GEDTTLIELN KLRERVQELT 180
  181 SDLNREKKDK EAVKSQAESI NREYDRLTEE YSKLQKKITI GGGGNKDD

Type	Start	End	Confidence
Cytoplasmic	1	6	0.65
Transmembrane Helix	7	28	0.91
Non-Cytoplasmic	29	47	0.63
Transmembrane Helix	48	67	0.93
Cytoplasmic	68	99	0.69
Transmembrane Helix	100	118	0.81
Non-Cytoplasmic	119	228	0.67