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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: pyx-PA
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.69
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MENVRFSIIE NDLKWNSESD PTADVDLLLD KRSISSEANS AGVFSDEAHE IFARQQQNQI  60
   61 LWDLDEVKET LTESPGGKHV VDMVQSGCFL ELMTDSADCN LALICCSVFG SVENTLFLLK 120
  121 HYNADPNVAD SRGRTPLHFA CCRANAPIAK VLLDFGADPN RWDARKEVTS LHCAASSKSV 180
  181 ECILLLLRRK ASINIGIEKR SALHYAIDVN AVDCVEILLK YGADPNTPQV YTETPLHTAS 240
  241 AAGFAKCVQL LLSHNADVRS QFGEGKVTAL HLAAENDYVE CARLLLEHRA EVDCRNASHQ 300
  301 TPLHLACLSQ SIGTVDLLIS YGANVNAVYR DGRTALHAAI VKQSRSLDCC NALLKAGADV 360
  361 NKADNYGYTP LHIAALNEFS SCVYTFIEHG ADITARTDGR VSALSFIVRR TPEIIPKLMQ 420
  421 KLDSSIKAND QEIGDVDCQI KLDFRLLVPS SSMDRGETEL LLSLIEVGQK RILMHPLCET 480
  481 FLFLKWRRIR KFFLMSLAYH TLFVILFTFY VIWVYVRCCK KEELCVAPGY VSTIGYLVII 540
  541 LNLILLGKEV FQMAHGLRGY AKYWENWLQW TIGTGVLLCV TPETVRTDDL TAVPVWQHHV 600
  601 AAIVILLVWL ELMMLVGRFP IFGVYVQMFT KVAVNFAKFL LAYICLLVAF GLSFAVLFND 660
  661 YPAFENITWS FLKSITMMSG ELEFEDIFYG DYAVKFPVTA HIIFLSFVLL VTVILTNLMV 720
  721 GLAVSDIQGL QVSATLDRLV RQAELVSRLE SLFFSRLLRS APTNLIQLCK RSALLRTSRD 780
  781 KLQFTIRPND PRDNQLPEDI KLNVYKLVAE RRDRNQSLRR RQFENNYNIF SRSLQRQQQP 840
  841 LHTDFLKPEP ATGTTKKTPQ NLFHMHELLR PRSATNVPQQ FRQEAEGTVQ MKNQANVLSA 900
  901 VLAEVQAIKT QLVDLVAKFE RFSENATRKL NYSTDELCRL RQQGQSVASS HIRRHR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle