YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: Lsp1gamma-PA
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLTLVILAL VACVTAFSVP TQKVKIADKN FLEKQKFLFE IVHRIDEPLM FEEWIKMGQK  60
   61 LITDKAQYET FDFYMEKLWE SYKLGALLPK GEFFGALVKT HHKQAYGLFN FFYYAKDWET 120
  121 FVRNVAWARI HVNEGMFVYA LTLAVIHKPE FEGLILPQIY EIFPQYFFNS KFVYAAEKFD 180
  181 YEVFSKLTMY EKEYKDILYK DYSEFTGNFY FYTKDWKTWQ WYKMMGLDQE WYVEDKYFLR 240
  241 ENLSQFVNDP KYVDVVKGLK KFYMPVDYTR DIDFFNDETK MTYFTEDLGW NAYWYYLNMD 300
  301 YAFFLNGKQF GLDKDRRGEY WIYNVQQILA RYYQERLANG FGEIPEFFWY KQIEYGYDPQ 360
  361 LIYYNGIGYS YRKNYYDFYT YGKFEMYSQI QNFFSRVYKV LETGFYKTAD GQVFDLHKPE 420
  421 AIKIVGNYLQ GNADTFDKYF FNYYYLLAHM YFADVDYNDM EVFPNVFLNF ETMLRDPFFY 480
  481 TFYKKFTDVF YTFKYYLKPY TQKDLFYEGI TIKDVSVSKL VTYYDIVDFD VTNLLNDKMT 540
  541 FVDGQYIWDK ALLARQARLN HKPFNFEFTI DSDKVQKGVV RVFLGPKFDE YGRVIPLDYN 600
  601 RKNFVQIDSF VYPFIAGTNT IKRSSKEFSW TAEDRITYTE LYKYVMLASE GKYDFPLDIS 660
  661 EPHNAFPDRL VLPKGWEQGM PMQFYFFVSP FAETYEQFSN FDYTYSSGVG SGTRFVDTKP 720
  721 FGYPFDRQID ESDFFVPNGF FKDVKVYYVD TFAKYFEKKY TQFGTFDYSI EY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle