YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FBpp0293340
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.61
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPENSVVVQL MQAVGGGIAG AATRTITQPL DVLKIRFQMQ VEPVTNHKGS KYRGVIHAFK  60
   61 SVYAEEGMRG MFRGHNSGQV LSISYALVQF WSYEQLRSMA HQFDYWRERP FLMFFICGGI 120
  121 AGCLGAVAAQ PFDVVRTQMV AADPSSRRSQ MNTFTGLRKV YKMEGWMGLS RGLPFTLVQV 180
  181 FPLVGANFLF YKYLNAAVLM AKPPDQRQEI HGAFLFLNGA LSGVLAKMIV YPADLLKKRI 240
  241 QLMAFKQERK TFGRNPECPT ILGCITTTFR EEGIGGFYKG MLPTLLKAGL MSAVYFSIYD 300
  301 MFKRHYIAPM KEAEKNRQKL GKH

Type	Start	End	Confidence
Cytoplasmic	1	110	0.74
Transmembrane Helix	111	132	0.91
Non-Cytoplasmic	133	172	0.73
Transmembrane Helix	173	194	0.86
Cytoplasmic	195	209	0.71
Transmembrane Helix	210	231	0.86
Non-Cytoplasmic	232	282	0.68
Transmembrane Helix	283	302	0.61
Cytoplasmic	303	323	0.77