YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ST6Gal-PA
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRQVTRASSG QSQALLSCLI IAVCAALIIQ SGHIQGVKAQ PGREPGEVNS RQPGNGNGTT  60
   61 GHRVPRSVFH VRWNPNEKFI VESRENPAIN SSKLAPHPRL KVSKNTKLTL SPKLYLCHDK 120
  121 HSELCHNKTQ QFRQRIVRAF EKAMVESVNE SQANHYNVDY KPVFGDSFEE QYYPSTCLVM 180
  181 EAGVRVLRRK DAPFNKLPFG RLFPRQKLFR NVKDIKTCAI VSSAGSLAGS KLGRFIDTHD 240
  241 IVMRFNHAPT QGHEVDVGSK TTIRVVNSQV VTKPEFDFTR APIFRNVTIA AWDPGKYNGT 300
  301 LEDWLTSADY DLFSNYELYR RRYPKSRAFL IDPHSVWRLW QSLQMFAGNR PISKNPPSSG 360
  361 FIGLALLLPH CPQVDFVEYV PSTRLNGRCH YYSKEMNSAC TFGSWHPLAA EKLMALDMNM 420
  421 AEDDDMSVFQ FGILRIRRPD KLLCGFNFFG Y

Type	Start	End	Confidence
Signal Peptide	1	39	0.86
N-region	1	30
H-region	31	36
C-region	37	39
Cleavage Site	39	40
Non-Cytoplasmic	40	451	0.99