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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: mAcR-60C-PA
Protein type: Transmembrane
Type Confidence: 0.92
Topology Confidence: 0.45
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEPVMSLALA AHGPPSILEP LFKTVTTSTT TTTTTTTSTT TTTASPAGYS PGYPGTTLLT  60
   61 ALFENLTSTA ASGLYDPYSG MYGNQTNGTI GFETKGPRYS LASMVVMGFV AAILSTVTVA 120
  121 GNVMVMISFK IDKQLQTISN YFLFSLAIAD FAIGAISMPL FAVTTILGYW PLGPIVCDTW 180
  181 LALDYLASNA SVLNLLIISF DRYFSVTRPL TYRAKRTTNR AAVMIGAAWG ISLLLWPPWI 240
  241 YSWPYIEGKR TVPKDECYIQ FIETNQYITF GTALAAFYFP VTIMCFLYWR IWRETKKRQK 300
  301 DLPNLQAGKK DSSKRSNSSD ENTVVNHASG GLLAFAQVGG NDHDTWRRPR SESSPDAESV 360
  361 YMTNMVIDSG YHGMHSRKSS IKSTNTIKKS YTCFGSIKEW CIAWWHSGRE DSDDFAYEQE 420
  421 EPSDLGCTSM NVMRDNYSMG GSVSGVRPPS ILLSDVSPTP LPRPPLASIS QLQEMSAVTA 480
  481 STTANVNTSG NGNGAINNNN NASHNGNGAV NGNGAGNGSG IGLGTTGNAT HRDSRTLPVI 540
  541 NRINSRSVSQ DSVYTILIRL PSDGASSNAA NGGGGGPGAG AAASASLSMQ GDCAPSIKMI 600
  601 HEDGPTTTAA AAPLASAAAT RRPLPSRDSE FSLPLGRRMS HAQHDARLLN AKVIPKQLGK 660
  661 AGGGAAGGGV GGAHALMNAR NAAKKKKKSQ EKRQESKAAK TLSAILLSFI ITWTPYNILV 720
  721 LIKPLTTCSD CIPTELWDFF YALCYINSTI NPMCYALCNA TFRRTYVRIL TCKWHTRNRE 780
  781 GMVRGVYN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle