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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CG3394-PA
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.43
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSENEKRPDL EDQDQDQNQE QAGGRKMEIL LELNLKQKLA TRLGTILLAT VIFGAFCWDN  60
   61 ALASLTLGAV VALLLRNPTF VFALVMTASR DLKAFQRFVA LNIYLLRKDR GGFTVARCFQ 120
  121 DQARRRPKKT CFVMDDRHLS FAEALEFSQK IAGYFSDRGL ERGDCVALLM ETRLEYPCIW 180
  181 LGLSQLGVIT ALINSNLRGE SLLHSIKVAN AKALIVGSEL LDVLVSLREK EQLDEVPIYQ 240
  241 YTDDEVRGVA GHDLLPGAVD LVTALKTQKK LELPSAVCPG EARSKLLYVY TSGTTGLPKA 300
  301 AVITNLRFLF MSAGSYYMLK MSSDDVVYDP LPLYHTAGGI VGVGNAILNG STVVLRKKFS 360
  361 ARNFWLDCDR HNCTVAQYIG ELCRYLLATS YSPDQQKHNL RLMYGNGLRP QIWSQFVRRF 420
  421 GIPHIGEIYG ATEGNSNLIN ITNRVGAIGF VPVYGSSLYP VQVLRCDEYT GELLKDSKGH 480
  481 CIRCQPGQAG LLVGKVDARR AVSAFHGYAD KGASEQKLLR NVFTSGDVFF NSGDMVVRDI 540
  541 LGYFYFKDRT GDTFRWRGEN VATQEVEAII TNCVGLEDCV VYGVQIPHVE GKAGMAAIVD 600
  601 PERKVDMDYL SVVLRGSLPP YARPLFIRLL DEIPRTATFK LKKRELAKEA YDIGQLSDPI 660
  661 YYLNRDGIYR PLSQEQHELL RSGKAGL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle