YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	DnaJ-60-PC, DnaJ...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRLCLPTRA GYVRNFSNDK PRKPETHYEV LNIRNDCSTR EVRNAFVQLS KLYHPDVKSN  60
   61 AACPERTARF VQISEAYKTL IKPERRRDYD DSLLWQPSRS DRSPVGETVN PGQAWDVRPN 120
  121 YDPNPGPYYG IRGLKRVSNW QVAVVLMALG FVGALFGFTS VRSSFKLSRQ IQDEISAEAN 180
  181 SHHAAVVADA QKYGNEEQVR RMVDRMSRSP FNQSSAK

Type	Start	End	Confidence
Cytoplasmic	1	139	0.91
Transmembrane Helix	140	161	0.91
Non-Cytoplasmic	162	217	0.91