YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CG30184-PA
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.77
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQVRSKKPVW FLFKMMELLL SLGCCLVHWT CFMEEGVPHI FLLCGTYGGS VIICFISLIG  60
   61 AFYAERPTMK HEALFGGILG GLHMVTVYAN MYVATLEEFR TERWPSFYAC CRDNAIVALY 120
  121 AGAIYLMHCT FALDLMFSHS RSRANQKMHP QRSKRPLQLY FISRGAEAYL SRFWFFRRIA 180
  181 ARMLTSAQPS EHSGRKRQVS SSESDSDAKE REEERIRNSE VFK

Type	Start	End	Confidence
Cytoplasmic	1	9	0.97
Transmembrane Helix	10	32	0.93
Non-Cytoplasmic	33	38	0.91
Transmembrane Helix	39	63	0.91
Cytoplasmic	64	72	0.91
Transmembrane Helix	73	94	0.92
Non-Cytoplasmic	95	115	0.92
Transmembrane Helix	116	137	0.89
Cytoplasmic	138	223	0.77