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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: alphaPS5-PA
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.96
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNFSPLPNRV IDAPKHLKTR MIQVRSSYFG YSLVIRPTSI FVGAPRAQST LESQGSINET  60
   61 GAVYRCPLAS GSCSHYVLND KLNKQFQWLG GSMDGGTKDT DKLLVCAPRF FVPKNKNYGQ 120
  121 MRGICYWVRD TVADTPPLSD VRTISLIPSQ AEEHFMLELG LSAHVTDDNS GFLIGAPGVR 180
  181 SWKGSVLVHR GEDLAAQGSY AVKMLDSWDW VKNHFTYVGY ALSSGYFSSN NRTSLLYVTT 240
  241 APSSVLNTGK AYIFDVVGEI VRKLHVFHGE QLGEYFGYSV VAEDLNGDGL TDVVVSAPLN 300
  301 ALGDSYDVGA IYVFINKGLF KFEKKIIRLP LSSGARFGSS LSKVGDINHD GYNDLAVGAP 360
  361 FAGNGAVFIF LGSEHGLRDE PSQRLDAPSR EPGPYGAHMF GQGLSRGSDI DGNGFNDLAI 420
  421 GAPGAEAVYL YRAYPVVKIH ATVRSESRAI RPEQETITVT ACYRLETTSK ARQMQQQELT 480
  481 FRMTIDELLQ RVSFAPMRTN EVSFQAQAGL SGSCRNFSVG VHYTGGIFTP IDLELHYELA 540
  541 KKIPHSHEAF CESCAVVDPL EPKYATGTLS FMTGCAAHVC VSDLQLSSKD VNSSFIFGSL 600
  601 EVLSFSYEIT NSGEPAYVAQ FNVTSSARLP FAKVPGNCRV RHEVMLCDLN GGRALARGDS 660
  661 ESLTIIFDVT QLSGQSLTIE AAVSSAGMDQ NPKDNTMSTT ISLREYAEID ASGGPIDGHI 720
  721 ALKEYPYSAE VNNSYEFKSH GPSIIDELTV YVDVPIAYTV TGSAGIKSIF NISSLQMQAT 780
  781 HGSELVPIKL YDQTNTLAKE YPLEDSSRRA NRKRRELQQD QYAIMPDVNI SDILTKENLP 840
  841 ANRTLVLDCL RGNWTICVRS QMRVQLKPEQ PIDLRISFKV DLNDFVNTFD YLVIFTNVEM 900
  901 FKEGDSTSIA LKRNLKPNVI FNYSETPLPI WYIILSLIAG HLLLGAMTYI LYKLRFFKRG 960
  961 KKEELKRLLE EHRSETKEPA TDCEGNQEEI NVEMHSDLEN 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle