YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	Gr59e-PA
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.77
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSSYWENLL LTINRFLGVY PSGRVGVLRW LHTLWSLFLL MYIWTGSIVK CLEFTVEIPT  60
   61 IEKLLYLMEF PGNMATIAIL VYYAVLNRPL AHGAELQIER IITGLKGKAK RLVYKRHGQR 120
  121 TLHLMATTLV FHGLCVLVDV VNYDFEFWTT WSSNSVYNLP GLMMSLGVLQ YAQPVHFLWL 180
  181 VMDQMRMCLK ELKLLQRPPQ GSTKLDACYE SAFAVLVDAG GGSALMIEEM RYTCNLIEQV 240
  241 HSQFLLRFGL YLVLNLLNSL VSICVELYLI FNFFETPLWE ESVLLVYRLL WLAMHGGRIW 300
  301 FILSVNEQIL EQKCNLCQLL NELEVCSSRL QRTINRFLLQ LQRSIDQPLE ACGIVTLDTR 360
  361 SLGGFIGVLM AIVIFLIQIG LGNKSLMGVA LNRSNWVYV

Type	Start	End	Confidence
Cytoplasmic	1	29	0.82
Transmembrane Helix	30	48	0.84
Non-Cytoplasmic	49	64	0.77
Transmembrane Helix	65	86	0.81
Cytoplasmic	87	120	0.92
Transmembrane Helix	121	141	0.93
Non-Cytoplasmic	142	158	0.88
Transmembrane Helix	159	180	0.89
Cytoplasmic	181	247	0.93
Transmembrane Helix	248	270	0.88
Non-Cytoplasmic	271	283	0.77
Transmembrane Helix	284	302	0.77
Cytoplasmic	303	361	0.79
Transmembrane Helix	362	382	0.92
Non-Cytoplasmic	383	399	0.77