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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|45552799, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.48
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNEPENLKPP AKSNFRRYLQ WILAPVLTAI SGLILYYQGP WYGVATLYAA LISILLVRPG  60
   61 WRWFYIAAVT TPRDTVALFA YIRVLLFIKR QERKNLNIGD IFESNVARQP DKLAIVSESQ 120
  121 QWTFRQVNEH SNRVANVFHS HGYKKGDVVG LLLENRAEFV ATWLGLSKIG VITPLINTNL 180
  181 RGASLQHSIT VGQCTALIYG ASFRSAVMDI AKDLPAHVGL YQFNDESNQE VVASEGLSQG 240
  241 LAQQLNGLLE TAAKDKVAAG ASRADHHDKL VYIYTSGTTG LPKAAVITHS RYFFIAAGIH 300
  301 YTLGFKDQDV FYTPLPLYHT AGGVMSMGQA LLFGSTVVIR KKFSASGYFS DCARFQCTVG 360
  361 QYIGEMARYI LATPSAPHDR NHQVRMVFGN GLRPQIWPQF VERFGIRKVG EFYGATEGNA 420
  421 NIMNNDSTVG AIGFISRILP QIYPISIIKA DPHTGEPLRN SQGLCERCEA DEPGVFVGKI 480
  481 VRGNPCREFL GYVDQKASSK KVVHDVFSKG DMAFISGDLL VADERGYLYF KDRTGDTFRW 540
  541 KGENVSTSEV EAQLSNLAGY KDVIVYGVSI PNTEGRAGMA AIYDPTREVN VSQLGVELAK 600
  601 SLPNYARPQF LRFLRKIDLT GTFKLRKVEL QQQGFNPEII DDELFYAQPD GVYAPLTPSV 660
  661 YERIVRNELR F

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle