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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: MED23-PA
Protein type: Transmembrane
Type Confidence: 0.79
Topology Confidence: 0.49
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 METQVIDTVN EFLKVDSLDE AFVSVIVFKP NTEQERATRF ANDLVTAFGN VAQENREQVL  60
   61 RLYLLRAAGA SGYHIKVLMA ALVKLVDAHV ITARMLCDKV LMCEKLDFEH RTFWIESFRL 120
  121 IKRVIVQVDY KGVREIMKVC RDKAQWFPLN VNVTYMPQLL AVEDILRFIF DRNNCLLPAY 180
  181 FIANEIMRPF PYHWKLNRLM TDFVEEFRTT AQMVSIIGHA SMLPIVEHFG YADHMMNSWR 240
  241 LDHNTLKFNF KGSLPYEPEL LEEQKPLLRY VLEQPYSREM VSQMLNLQKH QKQRYNALEE 300
  301 QLVNLIVQAM EMTEANDATA GSGFNSSDEQ ITPYEWMWLH LSSQLIYFVL FQFVSFMHIV 360
  361 LALHEKLSKL ELRKGRDQLM WILLQFISGS IQKNPITNFL PVFRLFDLLY PELEPLKLPD 420
  421 INKSSMVRHM APICVWIHLM KKARVENMNI TRPLPIALKN HYDFLQHLVT ANTMMNMTLG 480
  481 NDFRIILICN AYSTNQEYFG RPMGLLLDAL NGTSKSPNGG QIPAVTFSVT VLDSLTVHSK 540
  541 MSLIHSFVTQ MLKQAQSKGQ VPAAALLETY ARLLVYTEIE SLGIKGFLSQ LMPTVFKNHA 600
  601 WAMLHTLMEM FSYRLHHVPT HYRVQLLSLL HSLSSVPQTN KMQLNLCFES TALRLITSIG 660
  661 SAEFQPQFSR YFNDKSPGAV ASNESEELNR VLILTLARSM HVHGGGDEMQ GWCKDFLSNI 720
  721 IQHTPHSWPM HSLACFPPAL NEYFTQNNQP PENKQQLKKA VEEEYRTWTS MTNENDIIAH 780
  781 FLRPTTNPLF LCLLFKIIWE TENISPVAYK ILEGISARAL STHLRKFCDY LVAEVASSSD 840
  841 GRDFIHKCVD TINNMIWKFN VVTIDRVVLC LALRTHEGNE AQVCFLIIQL LLLKASELRN 900
  901 RVQEFCKDNN PDHWKQSNWQ DKHLSFHQKY PEKFALDESA SQIPLPVYFS NVCLRFLPVL 960
  961 DVVVHRFIEL TITNVHQILG FILDHLSILY KFHDRPITYL YNTLHYYERI LRDRPALKKK1020
 1021 LVGAITSAFS EIRPPNWSVS EPYKVYLQSQ DSLWTPELSY YMSLIRRLAD TISGKNVFYS1080
 1081 TDWRFNEFPN APTHALYVTC VELLGLPVAP PLVASNLIDV IVSGYAVIPQ KDIHSYINAV1140
 1141 GIVLAALPEP YWSGIYDRLQ DMLNTPNMLN WTYRFNAFEL FNFKTVREAM LEKTYAVVLA1200
 1201 VAHSVFHHMG AFKLAAMTRY LKEKLKPCVR TEQQLLYLCH VFGPFLQRIE LEKPNAVAGI1260
 1261 AVLLYEILEI VDKHHGPKPL QYMDQICDFL YHIKYIHVGN IIKNESEAII KRLRPLLQMR1320
 1321 LRFITHLNLE DIHTEKINDN TSNNAITSQT QSPMQTQHQQ QPQQPHQQQQ QQQQQQQQQQ1380
 1381 QQQQQQQQMQ QQQINAVQTT SVPLGSGGNL QQQQQINQQQ QMYMQHMQQH QHMQNMRHN

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