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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CG3701-PA
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.53
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVLCFKRISK WRGRWCRSRR KKKEERESLQ QTENELWLEY FSPYLHIWPF HELCARLEAN  60
   61 VSQGLTSEAA GRKLARNGKN VLPLPTKLEL RPWIFLKSCF SILGIIILLS SIASFAMYYL 120
  121 FATKTPDNGK VDPEFLVAGI ILLVTFFLAG LTVQMQGDDD EDMLIAFDEL MPMYCTVIRD 180
  181 GEKEVIRTQD LVPGDTLPIK YGQRLPADMR FFSTTGLELN NVALTGHSKP MHITPLANEG 240
  241 RQRYSRIDNM GLACTHAISG IGFAVALACG RNTEVGSMTD LCFKERSRSR SQKHQKQISY 300
  301 YMLLVAIVCF ILLFLTTGFE HGHIVYEVNL SLLIGLTPVY LPFILYWGLR RTRKEMGRKQ 360
  361 CHVRNLRATC TLGLSTVIVS DLVGTMTKRR MRVSEIFVDM GLLSVDNLDV SAQSPRFIEL 420
  421 IRASVLCNDA VICPGNIGVP KMQKDMYGNI LDIALLKFGL MILPSIDLLR HDHEKVANKH 480
  481 YNSEDKVQVT VHRTRDADGH LKLVLLMKGH CEVVIRRCST FAIRDEELPL DEQLQEIILS 540
  541 LADGLLEAGR HVRAFAYKEL SDELEFRRFS QVNTGLEGGE YKYRDYLAVD TYSLRFLGMI 600
  601 ATYNPPRSTI PKAVDRCRAA GIKLIVVTQR KPKMAKALAV DVGILPAPSD TFQAVNLKRM 660
  661 PPTAEVVDMS QYADEKPQHQ RRHIEQLILN QQDLVCAATS TDQLHWIADA CRRLGAVVSV 720
  721 IGGTLHDTPA MRSSHVGVAK YGSAVMCEAS ADLILLDTSF ATLVSVVGDS RLLFENLKKA 780
  781 LAYCLATNIC NILVYLFFFL LGIPLYIHIM DELILAFLVN LVPALTLIYE PPEENLMLQM 840
  841 PKVYDDFLLN SRLFFVSHIL VGTIEAAAVF MTYFVFMADK GFLPRTLVAL NIAWHDDMLD 900
  901 DITDSFGQEW SSEARRQLEC QVSSLCLMSL AVMQCTNLVL TKTGRANLLA HGFRNWLLSL 960
  961 AVLLLICLCV QLCIMDSTVC LRLEGTNELH FGHFLLTNCP FMILLVFIET TRRYFIRLFP1020
 1021 DSWLELATMY 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle