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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ppk12-PA
Protein type: Transmembrane
Type Confidence: 0.97
Topology Confidence: 0.61
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEPSPSAGTE RQGSSLFLLK SFVRSLRQFL NQTSLHGLKF VGDSGLSSWE RSFFLGSFVT  60
   61 ALIITVHLIS NIYVKWDSTP VIIGISPQAT SILKVPFPAI TICNMNQVQR SLVANYREGS 120
  121 NESALLKLLC ESDSWESSEA DEEFSASNFV TNNLKISEFV SNHSQSCERM LLFCRFSAVE 180
  181 RNCSQLFQQI LTDEGLCCVF NFQPPEYLYK PFANNNRNLT NSDGFESVMW DPESGYPEQL 240
  241 PPKFYPATAS GTGITLGFTA VLDAEMGEYY CSSTNGPGFK VYFHNPIEVP KVKEAGLISA 300
  301 IGYETNYRIE MVRAEAVPAI RSISRDGRQC LFKNEKELIF YRIYTRLNCE NECLAAFLYD 360
  361 TCSCIPFDHP LIYSNASICS MGDTSCVRRA QRASNRPGWA KCRQQCLPSC FDLNYLASGF 420
  421 SFPLASNNFQ LANALVESFN KSYLSKNIAV INVYFRESVY YGNTKNAYVG LTEFLSNVGG 480
  481 VMGLFMGFSV ISLAEILYFL ILKPLAELFV WKRSSHVDSE KSLKHNAFGI EKGQSSDNPS 540
  541 FWHSKELYPK GVSISAYENA KSTKGLNYQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle