YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	Gr58c-PA
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.65
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNQYFLLHTY FQVSRLIGLC NLHYDSSNHR FILNHVPTVV YCVILNVVYL LVLPFALFVL  60
   61 TGNIYHCPDA GMFGVVYNVV ALTKLLTMLF LMSSVWIQRR RLYKLGNDLM KMLHKFRFNL 120
  121 GNDCRNRCLC KGLLTSSRFV LLTQQLLTRD SVVNCESNSS LRQAMVPYQS AAIVYALIMI 180
  181 LLMSYVDMTV YMVEVAGNWL LVNMTQGVRE MVQDLEVLPE RNGIPREMGL MQILAAWRKL 240
  241 WRRCRRLDAL LKQFVDIFQW QVLFNLLTTY IFSIAVLFRL WIYLEFDKNF HLWKGILYAI 300
  301 IFLTHHVEIV MQFSIFEINR CKWLGLLEDV GNLWDINYSG RQCIKSSGTI LSRKLEFSLL 360
  361 YMNRKLQLNP KRVRRLHIVG LFDLSNLTVH NMTRSIITNV LVLCQIAYKK YG

Type	Start	End	Confidence
Cytoplasmic	1	37	0.90
Transmembrane Helix	38	60	0.89
Non-Cytoplasmic	61	73	0.82
Transmembrane Helix	74	97	0.86
Cytoplasmic	98	170	0.97
Transmembrane Helix	171	191	0.89
Non-Cytoplasmic	192	261	0.81
Transmembrane Helix	262	283	0.92
Cytoplasmic	284	289	0.70
Transmembrane Helix	290	310	0.80
Non-Cytoplasmic	311	412	0.65