YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|24657035, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNNFLEYISV LHCSSMSKSN LVISCLLLVA ISNSLVRAQD LKVEVISTPE VCEQKSKNGD  60
   61 SLTMHYTGTL QADGKKFDSS FDRDQPFTFQ LGAGQVIKGW DQGLLNMCVG EKRKLTIPPQ 120
  121 LGYGDQGAGN VIPPKATLLF DVELINIGNA PPTTNVFKEI DDNADKQLSR EEVSEYLKKQ 180
  181 MTAVEGQDSE ELKNMLAEND KLVEEIFQHE DKDKNGFISH DEFSGPKHDE L

Type	Start	End	Confidence
Signal Peptide	1	38	0.98
N-region	1	29
H-region	30	35
C-region	36	38
Cleavage Site	38	39
Non-Cytoplasmic	39	231	0.99