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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: cv-2-PA
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCCQSSGQWK FPAQQPRKSL ASRRRHTGFR PSTQLLILIA VLLALLQGRT VDAGAGDSLS  60
   61 GVRQSCSNEG EEVQLKNQPQ IFTCFKCECQ NGFVNCRDTC PPVNDCYILD KSNGTCCRRC 120
  121 KGCSFRGMSY ESGSEWNDPE DPCKTYKCVA TVVTETIQKC YSQCDNNQLQ PPRPGECCPT 180
  181 CQGCKINGQT VAEGHEVDAS IDDRCLVCQC RGTQLTCSKK TCPVLPCPMS KQIKRPDECC 240
  241 PRCPQNHSFL PVPGKCLFNK SVYPEKTQFM PDRCTNCTCL NGTSVCQRPT CPILECAPEF 300
  301 QEPDGCCPRC AVAEVRSECS LDGIVYQNNE TWDMGPCRSC RCNGGTIRCA QMRCPAVKCR 360
  361 ANEELKQPPG ECCQRCVETA GTCTVFGDPH FRTFDGKFFS FQGSCKYLLA SDCMGKTFHI 420
  421 RLTNEGRGTR RASWAKTVTL SLRNLKVNLG QRMRVKVNGT RVTLPYFVVA GGQNVTIERL 480
  481 ANGGAVMLRS EMGLTLEWNG AGFLQVSVPA KFKKRLCGLC GNFNGSSRDD LTGKDGRSHG 540
  541 DDEVWHFANS WKVGGPKSCS RKREFLAATP TCDKRKSNFY CHPLSVPALF GECNERLNPE 600
  601 NYKAACRMDV CECPSGDCHC DSFAAYAHEC RRLGVQLPDW RSATNCPAGW RRNATLSSFK 660
  661 GNQFYGDPSF SRMKGRRQKN HQLRLQLQQE QQQRSKQGQK GRHKPGGHNQ LDRQGHNGLD 720
  721 KDQLQKEFIL KHVPSSFLYP RAPDRTPPPL H

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle