YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CG15227-PA
Protein type:	Transmembrane
Type Confidence:	0.94
Topology Confidence:	0.79
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIDLCWLKFI RAFGLVMQLA EESRFIMMLI SCTMAVAFIL NLYSGRTIFQ DVVNAVGNRR  60
   61 LEMKLAKQPS PITIPESNMI KRQLKMPLHW TYYEDLPMAT VLENNGNTVI MRIYTANNFM 120
  121 PQLSGAELLG RYQFVEAIFK WGSLKSEHSI GKHNFCLELQ ALHRCAQLNN NFEYLTLSYL 180
  181 FALSHVKNEH LKQVTDHLKW ISQPGSSIEL PPFHLESLLQ PFGSGYFSYE GTYDNGDVVL 240
  241 PTTWLINRKI SVVDSRQLSE FEALYGRNGN RNCKNGREKQ PLGNRNVYFN I

Type	Start	End	Confidence
Cytoplasmic	1	24	0.79
Transmembrane Helix	25	43	0.89
Non-Cytoplasmic	44	291	0.90