YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	Cpr56F-PA
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKAFTSIALL VCLAAWTHAE PPVPQNQYLP PNQSPQAPSN NYLPPTQGYQ SPSSNYLPPQ  60
   61 RAGGNGGAPS NSYGAPIAPP QGQYGAPALT GAIFKGGNGN GNGGYGGGNG NGNGYGQRDE 120
  121 EQYGPAKYEF KYDVQDYESG NDFGHMESRD GDLAVGRYYV LLPDGRKQIV EYEADQNGYR 180
  181 PTIRYEQVGN GNGNGNGNGR NGGGYDSNAQ QGKFNGY

Type	Start	End	Confidence
Signal Peptide	1	19	0.99
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	217	0.99