YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CG16894-PA
Protein type:	Transmembrane
Type Confidence:	0.81
Topology Confidence:	0.69
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWYSTVRNPS IALIKQGYHI LAEYNLVKEE LKNIYAIPSY ACGLHWFGVI FVHSGIYAGS  60
   61 VFRFSILLPE NFPADISLPT VVFSTEVLHP HICPQNKTLD LAHFLNEWRK DEHHIWHVLR 120
  121 YIQAIFADPE GSICTGQSSS GDLVIMDEVR NMNALNMLAK SRPEYIKRVQ EQAILSRNLI 180
  181 YDRPPTEDPH YIIVEPYCAE RHLKFMDQLK SPCWKEATSM DCSQPSEYLG HIDSSRQLDE 240
  241 EEANQVEKLH RGRIPEHQRE ESEVSL

Type	Start	End	Confidence
Cytoplasmic	1	41	0.69
Transmembrane Helix	42	61	0.74
Non-Cytoplasmic	62	266	0.90