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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|220947552
Protein type: Transmembrane
Type Confidence: 0.78
Topology Confidence: 0.70
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTAAKRRASS SNSSGSSNTS GSSNGNEQHS QQQHLQLQQQ QQQHAQPNEY QQLLQHPHHH  60
   61 YQQHYSGNNN TSGNNSNSSN TQQYHQRQQQ HQATLRDCSV KLPLDILWLP KSAMRPAGPD 120
  121 TSPTDCILVV GVSRPKLAVV FLTVMLISLF LTFHVLYDSA VYNIQAAQAV HERHRLSMTA 180
  181 SASALASSSS SSSNSGSSFS SAGGASNHLP VFVKPVPSSN QLSHPMVFPS SRVHFPKTSR 240
  241 RLPQALIIGV RKCGTRALLE MLYLHPRIQK AGGEVHFFDR DENYLKGLEW YRKKMPHSFR 300
  301 GQITIEKSPS YFVSPEVPER VRAMNASIKL LLIVREPVTR AISDYTQLRS HAATAILPLA 360
  361 EKDPPSPRES SGGGAGGGGA GGGGGSGTAA AKMPTQSLLY AKLQSARGYD NALLGGSGAG 420
  421 AKETKGKTVS SSLVRRQALG SGGGVAGAAM TTTTMSPMAS AAQMAAKSFE ELAIFPNGTV 480
  481 NEAYRPLSIS MYHVHLHRWL EVFPREQLLV VNGDRLIEDP VSQLKRIEAF LGIEHRVNSE 540
  541 HFYFNETKGF YCLRYDNGDR CLRETKGRKH PHVDPVVVSR LRKFFAEYNQ RFYELVGEDL 600
  601 GWPEE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle