YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FBpp0293405
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Predicted Protein Segments [Hide List]:

Type	Start	End	Confidence
Cytoplasmic	1	63	0.97
Transmembrane Helix	64	83	0.92
Non-Cytoplasmic	84	91	0.84
Transmembrane Helix	92	111	0.96
Cytoplasmic	112	131	0.83
Transmembrane Helix	132	155	0.90
Non-Cytoplasmic	156	214	0.94
Transmembrane Helix	215	235	0.94
Cytoplasmic	236	243	0.87
Transmembrane Helix	244	266	0.90
Non-Cytoplasmic	267	294	0.93
Transmembrane Helix	295	315	0.91
Cytoplasmic	316	324	0.88
Transmembrane Helix	325	347	0.92
Non-Cytoplasmic	348	431	0.96
Transmembrane Helix	432	453	0.88
Cytoplasmic	454	473	0.84
Transmembrane Helix	474	496	0.92
Non-Cytoplasmic	497	503	0.86
Transmembrane Helix	504	527	0.93
Cytoplasmic	528	547	0.98
Transmembrane Helix	548	571	0.94
Non-Cytoplasmic	572	593	0.93
Transmembrane Helix	594	615	0.93
Cytoplasmic	616	675	0.99

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAATKIIDAP RNGHEMAPLN TRARGDGTHG VTIVLTAPQR NSVQSVDIPG NEPERAAWSG  60
   61 KMQFFLSIIG YSVGLGNIWR FPYLCQQNGG GAFLIPFMVM LILEGIPLFL IELGIGQRMR 120
  121 LGALGVWNTI HPWLGGIGIS SCIVTLFVAL YYNVIITWVF FYLFNSFRYP LPWSSCPLNG 180
  181 TGFELEECAK SSETTYFWYR TTLDAAPSMD EPGGLKWWIV LCLMLSWTIV FFIVMKGIQS 240
  241 SGKVVYFTSL FPYIVLTIFF IRGITLRGAG AGLMHMYTPK VEKLLEPTVW LDAATQVFYS 300
  301 FGLAFGSLIA FGSYNTPKNN CVRDVLLVSV CNAVTAIYAS VVIFAILGFK ATVNVDRCVA 360
  361 SNTEILVKNK LLGLNDTQGY EQAMSLLNGT ELLRLQLSEC SLAHELDNAA EGTGLAFIVF 420
  421 TQAIVELPGA PFWAVLFFTM LLSLGLGSQI GILEGMLCTL FDIDIIKRVK KQHVTGVVCL 480
  481 FCFIVGFIFC TGAGEYWLKM FDSFAGTIGL VVVALMEMIA VIFIYGHERF TEDIFQMTGY 540
  541 RPGRYWQWTW RYIGPVIMVC ILVSSVVFMV IRNPTYGAWN ADLGMIEQKS YPNWVMGIAL 600
  601 SMILAGVLPM PIVFLMRSFQ CLKVDLDIHQ GSIRRNETTA STKEMIDNDD DNMSPDMPPQ 660
  661 DSLAATRFTI GDFEN