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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CG12263-PA
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.77
Topology Confidence: 0.73
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNLTYLFVLI WLAFLISSGV MLFSRGFLLA RVSKTETSTC RRLSTNPNAE YVLTDEVVNE  60
   61 IFKDVNASSN LCLPQKSKVI VLVVDALKYE FGLYRANATD PLPYENKLVV LQELLQQNPD 120
  121 HARLMRFRAD PPTTTLQRLK GLTTGSLPTF IDIGSNFASP EINEDNIIDQ IVKNDLPVVF 180
  181 LGDSTWTDLY PHRFKRSYSY PSFDIFDLDS VDNEILKHLP KELESKDWQV LVAHFLGVDH 240
  241 CGHKHGPMHE EMARKLGEMN EVIRSVVAAM DNDTTLLVMG DHGMTASGDH GGDTDDETNA 300
  301 LLFAYSKQHR FYGNDSGSDS EMLQQIDLVP TLATILGVPI PYSNLGLVNF NIVPDLRVPH 360
  361 LNKFQTLLLH SWQNAQQIYR YFFQYALENK RTFNVEQMDH LETEFILLTH RVQTVYNEVA 420
  421 FKSFVRDLNT NLRDILGTCR EIWVRFDPTQ MSQGLLFTFL PLFFIFLVVN NSRPADFPHI 480
  481 FKAKEVFYVY LINLAAGVFG YRYFKTFSFK TEEQGVIFFT AISSAVILAF HTLRHWTSIA 540
  541 TNWSAVKRFG HMPTRLLLFG SMAVFFSNSF VIQEAKILSY LLAAAILLLS HELLRLSARL 600
  601 DFRTKFKASQ FLRSTALRLI LASVLAICLI RFAYTLFRCR EEQGNCSDFV NTGGAGFSLK 660
  661 KPGTGKTYIL AVVVLVVYTT LTRLYLRSCG NLTGNLPNVL LARYGPTVAS ICAGGHILLA 720
  721 NSSIKHIQRT HIDAMALVIY GLLLVQIIVL SWAPLMTFVL PPRSSHTVTI NGNESIVPEI 780
  781 FRKMKRMYEG DDDERRSHIP VVYGLATVYS SIVIAFGVFL ALVMIVLLEP RASIGLVVCV 840
  841 AVGAILLSVH SILRYRTATS FESCVQPTFT ALVGWFLLAH FCFFATSHQT TLSQIEWRAA 900
  901 FVGRTTGIGQ SNLVSGALVI LNTFCGPIFF FCMYSLLSTE TFSLFALFPN LIRSCRSGGK 960
  961 VDASTSMSDL ANEAVGFDMT RGELSLYEYE DVFLGTGFKL ATQFFMLQGL KIFCAMLACT1020
 1021 IHCRHLMVWK IFAPRFIYEA LATFVSLPAL IVGYLLVLRI HRGVDTLIKR INKAKVH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle