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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CG30104-PA, CG30...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.84
Topology Confidence: 0.61
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQSRWLCGIF VIVLAHWTRA NPILSHPKVA TEFIILHNND MHARFDQTSV NSGTCPPEDV  60
   61 HTNKCYGGFA RVAHEVRKYR KEAQEGGTSV LYLNAGDTYT GTSWFTIFKD KIASAFLNKL 120
  121 KPDAISLGNH EFDERVEGLI PFLNEVTFPV LACNLDLSKV PQLKATWHLA NSAILETNGT 180
  181 KVGVIGYLTP DTKKLTLNMD VEFNEEVESI NVEAKKLKAQ GIKIIIALGH SGYLKDLEIA 240
  241 KNCPEVDIVI GGHTNTFLYT GAQPDAEHID GPYPTMVKQN SGKEVPVVQA YAYTKYLGKL 300
  301 HVQFDADGNL IQWDGSPILL NASVAQEQDL LDLLEVFRPN VTRLEKSVVG HTKVHLEGNK 360
  361 AVCRAEECNL GNLIADAMVF SRLMEEQGGD FWTDAAISIM QGGGIRSSIE KRSDGAITDN 420
  421 DILSVLPWGN KLYMVPMTGS TIRRALEHGA ALRGKDSDGG FLQVSGIRVV FNSNKPEGQR 480
  481 VVSVQVRCAA CRVPTYSDLN DTAIYNVVLG EFLLDGGDGH VMRDSAHQPQ RLQNNDLEAV 540
  541 SQYLNQRDYV YPEIEGRIIF INASSTLMGS AALLLISSLL IKIIA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle