YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FBpp0309187, mth...
Protein type:	Transmembrane with Signal Peptide
Type Confidence:	0.99
Topology Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Predicted Protein Segments [Hide List]:

Type	Start	End	Confidence
Signal Peptide	1	21	0.99
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	215	0.99
Transmembrane Helix	216	236	0.96
Cytoplasmic	237	245	0.87
Transmembrane Helix	246	266	0.91
Non-Cytoplasmic	267	277	0.81
Transmembrane Helix	278	299	0.92
Cytoplasmic	300	317	0.90
Transmembrane Helix	318	339	0.91
Non-Cytoplasmic	340	368	0.96
Transmembrane Helix	369	391	0.92
Cytoplasmic	392	421	0.95
Transmembrane Helix	422	443	0.93
Non-Cytoplasmic	444	458	0.83
Transmembrane Helix	459	478	0.87
Cytoplasmic	479	511	0.97

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRIVIGSFTA FLLLLLQNSN AEIPGCDFFD TVDISKAPRF SNGSYLYEGL LIPAHLTAEY  60
   61 DYKLLADDSK EKVASHVRGC ACHLRPCIRF CCPQYQKMQK SKCYGDMSED ELNKHDPFVN 120
  121 VTLSDGSVVR RHFKEDLIVQ SDLAKPGCPR MYFLNHELPG NEFTLFENGS LLRHWDKVEL 180
  181 SKREYCVQHL SFKDDSIRIA PHFCPLSSEH SRTWKTVAIV ISLICIILTI SVYLYVEKLR 240
  241 NLHGKCFICY LASLFLGYFF LVLNVWKYSS GFCVTAGFLG YFSVIAAFFW LSVISLTLWN 300
  301 SFSGNSSWLN RFLPQNRFLS YNLYAWGMAL LLTAITYIAD QVVKNEKLRP RVGVGKNCWI 360
  361 YTGDMTVMIY FYGPMLLIIV FNITMFVLTA FRIMKVKKEA QNFTQQQKTT NRLNSDKQTY 420
  421 ALFLRLFIIM GLSWSLEIIS FLLSKNQAWA KAFMVADYFN WSQGTVIFLL FVLRPSTLKL 480
  481 LKERIKGGRD EAGASDEHIS LQNTKIDPSV F