YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CG9013-PA
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.58
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELSLDEPQC ASFFCILGAV CAIVFSTLGA AYGTAKASVG ISSMSIKHPQ LIMKAIVPVV  60
   61 MAGIIAIYGL VIAVLLAGSL SSPYSAYKGF LNLSAGLAVG VSGMGAGIAI GVVGEAGVRA 120
  121 SAQQPKLFVA IILILIFAEV LGLYGLIVAI YLFSK

Type	Start	End	Confidence
Non-Cytoplasmic	1	9	0.58
Transmembrane Helix	10	35	0.86
Cytoplasmic	36	54	0.55
Transmembrane Helix	55	77	0.92
Non-Cytoplasmic	78	89	0.53
Transmembrane Helix	90	114	0.85
Cytoplasmic	115	126	0.50
Transmembrane Helix	127	153	0.87
Non-Cytoplasmic	154	155	0.58