YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CG5550-PA
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKPICFALCV FSLGLFYLAS AEIGENVKIQ TYKKYSSSCK ELNPKKSGVQ KIQVGSDVIE  60
   61 VYCDVTIAGK GWLVVQRRVS VEENFYRNWT SYQTGFGDLK GNFFIGLNNL NKISSLQPQE 120
  121 LYIELVDFAG EKRYAHYSVF HVGNVYSNYP ITQLGAYSGT AGDSLSYHLY QPFSTFDRDN 180
  181 DNATINCAAR YMGAWWYREC LSSNLNGAYL GGNHTDPALF GSGIVWGEWK GFTYSYKTVN 240
  241 IMVRPK

Type	Start	End	Confidence
Signal Peptide	1	21	0.99
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	246	0.99