YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CG7997-PA, CG7997-PB
Protein type:	Globular with Signal Peptide
Type Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYGTWGVFLG GILLLQVLQL SMGLDNGLAL KPPMGWMSWE RFRCITDCKL YPDECISEKL  60
   61 FQRHADLLVS EGYADAGYEY VIIDDCWLEK NRDNDTQKLV PDRKRFPNGL NALSDHIHNQ 120
  121 GLKFGLYQDY GTNTCAGYPG VIKHMKLDAQ TFADWDVDYV KLDGCYANIS DMASGYPEFG 180
  181 RLLNETGRPM VYSCSWPAYQ EDAGEMPDYE SLKQHCNLWR NWDDIEDSLE SLMQIIDYFA 240
  241 KNQDRIQPHG GPGHWNDPDM LLLGNYGLSY DQSKLQMAIW AIMAAPLIMS NDLAAVRPEI 300
  301 KAILQNRAVI AVDQDELGIQ GRRVLSRNQI EVWKRPITPV TKSGHHSYAV AFVSRRDDGA 360
  361 PYRIPFTVKE LGLTNPKGYN VQDLYDASSK LGVFQSESQF ITRVNPNGVT FYKFTAL

Type	Start	End	Confidence
Signal Peptide	1	23	0.86
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	417	0.94