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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: Asph-PA
Protein type: Transmembrane
Type Confidence: 0.97
Topology Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGDVQPRKR KDKRRKRDDD ESSHGVHITK MGNEDLHLHV HHDHGTGGHW CAKIIFFALM  60
   61 AVLLGLVGLI IMENRGLEDL DTPLSESRFS KVFDGWVDEH RDEHDGHDVQ EPSGEALDDH 120
  121 DEHDDHDDHE DEDEEPLTEE LEEELEEEEE PTEEDEPAAD EEYEEDEDEE NNAGENITAE 180
  181 DAEEEEEEED NDDEGTVEAT VEATTEATTE ATGEYEAEED DEDEAAADDD AVESTEAPLS 240
  241 KAEEQEDDED EDEEEQEIEE SVEPERSQYA AQSAPAKDNN DDDDDDDQDK NDADDGDDDE 300
  301 FESLAQQFEN DPEDTVPAKA VESEEQDQDQ ADEEEPKEEG SSWLASQIKP KEAAPAPAEK 360
  361 EDPFEQELRK ANEEMIRENY AQALRSFNTL TTNFAHEPSA HLGRARLLEL LAKKERSNQR 420
  421 LWEAIDAYKR YLAFGELVAS NQEFQTAGES CIENLRFLGH HRQATTIHEL LINRLPEDPR 480
  481 LRNQLSLTYL MVNNLQQVEK VAVETLKLWP NNAVAQLHYG LALRQFHADY AKALPYLKYA 540
  541 VESGEEGTQE AFFYLSLGET MQRLSMKSEA LEVYGKGVAK GFFASLYQRS LYNEPRLRAQ 600
  601 PFWQPKETGY ERQLEKLTLN WRAIRDEGLA LLGRSGFFED EAELLRDKGV WQQYELYAQG 660
  661 RRVKDNCRRA PITCSLLEEF PESAGCRRGQ VKFSVMQAKT HVWPHCGPTN CRLRAHLTLA 720
  721 APEPEKASLR VAEQERTWRE GELFIFDDSF EHEVWHNGSQ SRLVLILDMW HPQLSAAQRR 780
  781 SLSPI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle